Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase, alpha subunit | AfiDRAFT_1611 | Not Available | - | 1625830 - 1626912 | 40046.8 |
| ribosomal protein l20 | AfiDRAFT_1612 | Not Available | - | 1627072 - 1627431 | 13101.2 |
| ribosomal protein l35 | AfiDRAFT_1613 | Not Available | - | 1627498 - 1627698 | 7453.36 |
| hypothetical protein | AfiDRAFT_1614 | Not Available | + | 1628039 - 1628230 | 6799.37 |
| translation initiation factor if-3 | AfiDRAFT_1615 | Not Available | - | 1628312 - 1628914 | 22688.7 |
| glycosyl transferase group 1 | AfiDRAFT_1616 | Not Available | - | 1628963 - 1630237 | 45887.0 |
| alpha/beta hydrolase fold protein | AfiDRAFT_1617 | Not Available | + | 1630427 - 1631218 | 29014.7 |
| glutathione s-transferase domain protein | AfiDRAFT_1618 | Not Available | - | 1631334 - 1632026 | 26084.2 |
| undecaprenol kinase | AfiDRAFT_1619 | Not Available | + | 1632230 - 1633036 | 29372.7 |
| nad-dependent epimerase/dehydratase | AfiDRAFT_1620 | Not Available | - | 1633041 - 1634006 | 33958.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
