Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hslvu, atpase subunit hslu | AfiDRAFT_1531 | Not Available | - | 1548739 - 1550040 | 47520.2 |
| protein of unknown function duf2585 | AfiDRAFT_1532 | Not Available | - | 1550081 - 1550689 | 22125.5 |
| 20s proteasome a and b subunits | AfiDRAFT_1533 | Not Available | - | 1550686 - 1551264 | 20522.6 |
| imidazoleglycerol-phosphate dehydratase | AfiDRAFT_1534 | Not Available | + | 1551432 - 1552025 | 21290.5 |
| protein of unknown function duf2506 | AfiDRAFT_1535 | Not Available | + | 1552055 - 1552546 | 18312.3 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | AfiDRAFT_1536 | Not Available | + | 1552543 - 1553193 | 23744.6 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | AfiDRAFT_1537 | Not Available | + | 1553190 - 1553927 | 25546.1 |
| imidazoleglycerol phosphate synthase, cyclase subunit | AfiDRAFT_1538 | Not Available | + | 1553928 - 1554704 | 27624.1 |
| phosphoribosyl-atp diphosphatase | AfiDRAFT_1539 | Not Available | + | 1554792 - 1555124 | 11842.2 |
| pantothenate kinase | AfiDRAFT_1540 | Not Available | + | 1555207 - 1556163 | 36645.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
