Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | AfiDRAFT_1521 | Not Available | - | 1539854 - 1541119 | 47092.9 |
| conserved hypothetical protein | AfiDRAFT_1522 | Not Available | - | 1541409 - 1541831 | 16229.6 |
| protein of unknown function duf299 | AfiDRAFT_1523 | Not Available | + | 1542363 - 1543214 | 31485.2 |
| maf family protein | AfiDRAFT_1524 | Not Available | + | 1543235 - 1543843 | 21488.9 |
| dephospho-coa kinase | AfiDRAFT_1525 | Not Available | + | 1543853 - 1544452 | 21455.8 |
| dna polymerase iii, epsilon subunit | AfiDRAFT_1526 | Not Available | + | 1544472 - 1545164 | 26037.2 |
| protein-export protein secb | AfiDRAFT_1527 | Not Available | - | 1545208 - 1545684 | 17163.6 |
| import inner membrane translocase subunit tim44 | AfiDRAFT_1528 | Not Available | + | 1545949 - 1546653 | 25570.1 |
| mlta domain protein | AfiDRAFT_1529 | Not Available | + | 1546595 - 1548022 | 52637.8 |
| smr protein/muts2 | AfiDRAFT_1530 | Not Available | + | 1548019 - 1548621 | 22113.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
