Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | AfiDRAFT_1491 | Not Available | + | 1505454 - 1506362 | 32340.6 |
| peptidase s16 lon domain protein | AfiDRAFT_1492 | Not Available | + | 1506392 - 1507066 | 24906.0 |
| protein of unknown function duf343 | AfiDRAFT_1493 | Not Available | + | 1507102 - 1507305 | 7405.09 |
| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family | AfiDRAFT_1494 | Not Available | - | 1507307 - 1508539 | 43844.7 |
| acyl-coa thioesterase | AfiDRAFT_1495 | Not Available | + | 1508682 - 1509566 | 32503.5 |
| nitrogen regulatory protein p-ii | AfiDRAFT_1496 | Not Available | + | 1509686 - 1510024 | 12199.8 |
| ammonium transporter | AfiDRAFT_1497 | Not Available | + | 1510069 - 1511379 | 45507.1 |
| nitrogen regulatory protein p-ii | AfiDRAFT_1498 | Not Available | + | 1511722 - 1512060 | 12066.7 |
| ammonium transporter | AfiDRAFT_1499 | Not Available | + | 1512101 - 1513576 | 50471.2 |
| aminotransferase class i and ii | AfiDRAFT_1500 | Not Available | + | 1513830 - 1515062 | 43944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
