Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii family protein | AfiDRAFT_1482 | Not Available | + | 1495912 - 1497597 | 61839.2 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AfiDRAFT_1483 | Not Available | + | 1497773 - 1499365 | 55626.6 |
| major facilitator superfamily mfs_1 | AfiDRAFT_1484 | Not Available | - | 1499362 - 1500747 | 48659.4 |
| gamma-glutamyltransferase | AfiDRAFT_1485 | Not Available | + | 1500867 - 1502579 | 60147.2 |
| short-chain dehydrogenase/reductase sdr | AfiDRAFT_1486 | Not Available | + | 1502599 - 1503480 | 31063.0 |
| protein of unknown function duf2239 | AfiDRAFT_1487 | Not Available | + | 1503553 - 1504137 | 21397.5 |
| protein of unknown function upf0047 | AfiDRAFT_1488 | Not Available | - | 1504134 - 1504604 | 17108.4 |
| protein of unknown function duf1810 | AfiDRAFT_1489 | Not Available | - | 1504601 - 1505035 | 16223.4 |
| Trna-gly | Not Available | Not Available | + | 1505157 - 1505231 | Not Available |
| conserved hypothetical protein | AfiDRAFT_1490 | Not Available | - | 1505267 - 1505410 | 4802.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
