Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| citryl-coa lyase | AfiDRAFT_1424 | Not Available | - | 1440737 - 1441624 | 31540.9 |
| carbonate dehydratase | AfiDRAFT_1425 | Not Available | + | 1441740 - 1442429 | 24912.8 |
| aspartate-semialdehyde dehydrogenase | AfiDRAFT_1426 | Not Available | - | 1442492 - 1443526 | 37563.0 |
| hypothetical protein | AfiDRAFT_1427 | Not Available | + | 1443846 - 1444220 | 13519.3 |
| 3-isopropylmalate dehydrogenase | AfiDRAFT_1428 | Not Available | - | 1444294 - 1445406 | 39520.9 |
| major facilitator superfamily mfs_1 | AfiDRAFT_1429 | Not Available | + | 1445532 - 1446722 | 40857.0 |
| oxidoreductase molybdopterin binding | AfiDRAFT_1430 | Not Available | - | 1446729 - 1447517 | 29523.5 |
| conserved hypothetical protein | AfiDRAFT_1431 | Not Available | - | 1447530 - 1448192 | 23829.9 |
| amp-dependent synthetase and ligase | AfiDRAFT_1432 | Not Available | + | 1448434 - 1449960 | 55831.3 |
| conserved hypothetical protein | AfiDRAFT_1433 | Not Available | - | 1450042 - 1450272 | 8226.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
