Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s16 | AfiDRAFT_1414 | Not Available | + | 1434438 - 1434767 | 12234.0 |
| 16s rrna processing protein rimm | AfiDRAFT_1415 | Not Available | + | 1434776 - 1435318 | 18843.3 |
| trna (guanine-n1)-methyltransferase | AfiDRAFT_1416 | Not Available | + | 1435315 - 1436034 | 25790.8 |
| ribosomal protein l19 | AfiDRAFT_1417 | Not Available | + | 1436138 - 1436527 | 14356.4 |
| glyoxalase/bleomycin resistance protein/dioxygenase | AfiDRAFT_1418 | Not Available | - | 1436599 - 1437009 | 14468.3 |
| 3-isopropylmalate dehydratase, large subunit | AfiDRAFT_1419 | Not Available | + | 1437053 - 1438561 | 54123.5 |
| conserved hypothetical protein | AfiDRAFT_1420 | Not Available | - | 1438646 - 1439017 | 14439.0 |
| conserved hypothetical protein | AfiDRAFT_1421 | Not Available | - | 1439148 - 1439375 | 8704.49 |
| conserved hypothetical protein | AfiDRAFT_1422 | Not Available | - | 1439573 - 1439887 | 11497.8 |
| 3-isopropylmalate dehydratase, small subunit | AfiDRAFT_1423 | Not Available | + | 1440065 - 1440670 | 22535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
