Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, marr family | AfiDRAFT_1404 | Not Available | + | 1424895 - 1425380 | 18046.2 |
| intracellular septation protein a | AfiDRAFT_1405 | Not Available | - | 1425393 - 1425995 | 22253.0 |
| signal recognition particle-docking protein ftsy | AfiDRAFT_1406 | Not Available | - | 1426004 - 1426960 | 33522.5 |
| pseudouridine synthase | AfiDRAFT_1407 | Not Available | + | 1427030 - 1427764 | 26681.2 |
| miab-like trna modifying enzyme | AfiDRAFT_1408 | Not Available | - | 1427753 - 1429006 | 45908.4 |
| diaminopimelate epimerase | AfiDRAFT_1409 | Not Available | - | 1429008 - 1429880 | 31596.7 |
| transcriptional activator ligand binding domain protein | AfiDRAFT_1410 | Not Available | + | 1430021 - 1430839 | 28115.5 |
| protein of unknown function duf541 | AfiDRAFT_1411 | Not Available | + | 1430850 - 1431542 | 23554.1 |
| twin-arginine translocation pathway signal | AfiDRAFT_1412 | Not Available | - | 1431556 - 1432530 | 35792.7 |
| signal recognition particle protein | AfiDRAFT_1413 | Not Available | + | 1432864 - 1434396 | 53982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
