Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf395 yeee/yede | AfiDRAFT_1394 | Not Available | + | 1416763 - 1417191 | 14570.2 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | AfiDRAFT_1395 | Not Available | + | 1417251 - 1417724 | 16877.5 |
| globin | AfiDRAFT_1396 | Not Available | + | 1417791 - 1418249 | 17266.7 |
| blue (type 1) copper domain protein | AfiDRAFT_1397 | Not Available | - | 1418256 - 1418573 | 11537.1 |
| conserved hypothetical protein | AfiDRAFT_1398 | Not Available | - | 1418609 - 1419130 | 18484.1 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | AfiDRAFT_1399 | Not Available | - | 1419252 - 1420778 | 54635.4 |
| gtp cyclohydrolase i | AfiDRAFT_1400 | Not Available | - | 1420965 - 1421591 | 23717.6 |
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_1401 | Not Available | - | 1421655 - 1422350 | 26376.7 |
| putative pas/pac sensor protein | AfiDRAFT_1402 | Not Available | - | 1422471 - 1422914 | 15886.9 |
| cl- channel voltage-gated family protein | AfiDRAFT_1403 | Not Available | - | 1422998 - 1424785 | 63284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
