Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | AfiDRAFT_1384 | Not Available | - | 1403342 - 1404118 | 30014.0 |
| dna modification methyltransferase-related protein | AfiDRAFT_1385 | Not Available | - | 1404115 - 1406868 | 102792.0 |
| plasmid maintenance system antidote protein, xre family | AfiDRAFT_1386 | Not Available | - | 1406865 - 1407167 | 11014.3 |
| integrase family protein | AfiDRAFT_1387 | Not Available | - | 1407280 - 1408635 | 49522.7 |
| amino acid adenylation domain protein | AfiDRAFT_1388 | Not Available | - | 1408875 - 1412807 | 141970.0 |
| protein of unknown function duf218 | AfiDRAFT_1389 | Not Available | - | 1412808 - 1413416 | 23178.9 |
| glycoside hydrolase family 3 domain protein | AfiDRAFT_1390 | Not Available | + | 1413678 - 1414646 | 35217.4 |
| protein of unknown function duf442 | AfiDRAFT_1391 | Not Available | + | 1414732 - 1416024 | 47004.4 |
| transcriptional regulator, arsr family | AfiDRAFT_1392 | Not Available | + | 1416018 - 1416362 | 12305.0 |
| protein of unknown function duf395 yeee/yede | AfiDRAFT_1393 | Not Available | + | 1416359 - 1416766 | 13712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
