Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma-24 subunit, ecf subfamily | AfiDRAFT_1324 | Not Available | - | 1339771 - 1340406 | 23605.2 |
| protein of unknown function duf2282, transmembrane | AfiDRAFT_1325 | Not Available | + | 1340783 - 1341130 | 11783.3 |
| protein of unknown function duf692 | AfiDRAFT_1326 | Not Available | + | 1341195 - 1342085 | 33559.0 |
| protein of unknown function duf2063 | AfiDRAFT_1327 | Not Available | + | 1342069 - 1342869 | 28401.8 |
| doxx family protein | AfiDRAFT_1328 | Not Available | + | 1342871 - 1343395 | 18710.6 |
| transcriptional regulator, lysr family | AfiDRAFT_1329 | Not Available | + | 1343518 - 1344435 | 33908.5 |
| protein of unknown function duf2274 | AfiDRAFT_1330 | Not Available | - | 1344432 - 1344659 | 8243.13 |
| conjugation trbi family protein | AfiDRAFT_1331 | Not Available | - | 1344656 - 1345852 | 41780.9 |
| p-type conjugative transfer protein trbg | AfiDRAFT_1332 | Not Available | - | 1345849 - 1346922 | 38409.0 |
| conjugal transfer protein | AfiDRAFT_1333 | Not Available | - | 1346919 - 1347608 | 25382.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
