Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmi | AfiDRAFT_1294 | Not Available | - | 1310186 - 1311301 | 39971.8 |
| periplasmic protein thiol/disulfide oxidoreductase dsbe | AfiDRAFT_1295 | Not Available | - | 1311514 - 1312137 | 21521.1 |
| hypothetical protein | AfiDRAFT_1296 | Not Available | - | 1312134 - 1312289 | 5568.9 |
| heme exporter protein ccmc | AfiDRAFT_1297 | Not Available | - | 1312297 - 1313070 | 28460.5 |
| hypothetical protein | AfiDRAFT_1298 | Not Available | - | 1313219 - 1313821 | 21814.4 |
| hypothetical protein | AfiDRAFT_1299 | Not Available | - | 1313865 - 1314953 | 38887.1 |
| cytochrome p460 | AfiDRAFT_1300 | Not Available | - | 1315022 - 1315597 | 20679.6 |
| cytochrome p460 precursor | AfiDRAFT_1301 | Not Available | - | 1315607 - 1316245 | 23698.0 |
| pas/pac sensor signal transduction histidine kinase | AfiDRAFT_1302 | Not Available | - | 1316826 - 1317833 | 37371.6 |
| cytochrome b561 | AfiDRAFT_1303 | Not Available | + | 1319323 - 1319874 | 19840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
