Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase domain protein | AfiDRAFT_1274 | Not Available | + | 1290840 - 1291946 | 39980.6 |
| alkylhydroperoxidase like protein, ahpd family | AfiDRAFT_1275 | Not Available | + | 1291990 - 1292565 | 20407.2 |
| sss sodium solute transporter superfamily | AfiDRAFT_1276 | Not Available | - | 1292668 - 1294197 | 53181.4 |
| protein of unknown function duf485 | AfiDRAFT_1277 | Not Available | - | 1294194 - 1294562 | 13775.8 |
| thioredoxin reductase | AfiDRAFT_1278 | Not Available | - | 1294687 - 1295667 | 34732.7 |
| haloacid dehalogenase, type ii | AfiDRAFT_1279 | Not Available | - | 1295914 - 1296666 | 28048.7 |
| glutaredoxin | AfiDRAFT_1280 | Not Available | - | 1296721 - 1296948 | 8551.23 |
| hypothetical protein | AfiDRAFT_1281 | Not Available | - | 1296964 - 1297821 | 31611.5 |
| conserved hypothetical protein | AfiDRAFT_1282 | Not Available | - | 1297840 - 1298322 | 17755.0 |
| transcriptional regulator, crp/fnr family | AfiDRAFT_1283 | Not Available | + | 1298529 - 1299293 | 28260.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
