Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily mfs_1 | AfiDRAFT_1235 | Not Available | - | 1250628 - 1251359 | 25187.2 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | AfiDRAFT_1236 | Not Available | - | 1251444 - 1252175 | 26837.8 |
| transcriptional regulator, lysr family | AfiDRAFT_1237 | Not Available | - | 1252172 - 1253107 | 34606.9 |
| alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen | AfiDRAFT_1238 | Not Available | - | 1253280 - 1253972 | 25235.1 |
| transcriptional regulator, lysr family | AfiDRAFT_1239 | Not Available | - | 1254062 - 1255009 | 33849.5 |
| uncharacterized peroxidase-related enzyme | AfiDRAFT_1240 | Not Available | + | 1255125 - 1255670 | 19376.2 |
| protein of unknown function duf488 | AfiDRAFT_1241 | Not Available | + | 1255710 - 1256072 | 13826.4 |
| hypothetical protein | AfiDRAFT_1242 | Not Available | - | 1256339 - 1256566 | 7414.43 |
| major facilitator superfamily mfs_1 | AfiDRAFT_1243 | Not Available | + | 1256818 - 1257417 | 19670.2 |
| abc transporter related protein | AfiDRAFT_1244 | Not Available | - | 1258438 - 1259223 | 28366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
