Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | AfiDRAFT_1156 | Not Available | - | 1170080 - 1171246 | 40923.0 |
| shikimate kinase | AfiDRAFT_1157 | Not Available | - | 1171258 - 1171872 | 22268.9 |
| conserved hypothetical protein | AfiDRAFT_1158 | Not Available | + | 1172048 - 1172194 | 5357.76 |
| tyrosine recombinase xerd | AfiDRAFT_1159 | Not Available | + | 1172210 - 1173169 | 35353.6 |
| acetyl-coa carboxylase, carboxyl transferase, alpha subunit | AfiDRAFT_1160 | Not Available | + | 1173286 - 1174248 | 34538.3 |
| pollen allergen poa pix/phl pvi | AfiDRAFT_1161 | Not Available | + | 1174441 - 1175868 | 51472.1 |
| preprotein translocase, seca subunit | AfiDRAFT_1162 | Not Available | - | 1175949 - 1178783 | 105987.0 |
| ppic-type peptidyl-prolyl cis-trans isomerase | AfiDRAFT_1163 | Not Available | + | 1179139 - 1180035 | 32125.7 |
| arginine biosynthesis bifunctional protein argj | AfiDRAFT_1164 | Not Available | + | 1180167 - 1181456 | 44708.0 |
| mutator mutt protein | AfiDRAFT_1165 | Not Available | + | 1181456 - 1181872 | 15495.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
