Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AfiDRAFT_1107 | Not Available | + | 1119841 - 1120086 | 8293.14 |
| nadh/ubiquinone/plastoquinone (complex i) | AfiDRAFT_1108 | Not Available | + | 1120138 - 1122135 | 70291.3 |
| respiratory-chain nadh dehydrogenase, subunit 1 | AfiDRAFT_1109 | Not Available | + | 1122126 - 1123079 | 33446.4 |
| conserved hypothetical protein | AfiDRAFT_1110 | Not Available | + | 1123079 - 1123741 | 24077.8 |
| nadh/ubiquinone/plastoquinone (complex i) | AfiDRAFT_1111 | Not Available | + | 1123738 - 1125186 | 51695.0 |
| nadh dehydrogenase (quinone) | AfiDRAFT_1112 | Not Available | + | 1125183 - 1126724 | 56224.4 |
| nadh ubiquinone oxidoreductase 20 kda subunit | AfiDRAFT_1113 | Not Available | + | 1126734 - 1127243 | 18439.6 |
| dead/deah box helicase domain-containing protein | AfiDRAFT_1114 | Not Available | + | 1127257 - 1127430 | 6234.6 |
| putative transcriptional regulator, arsr family | AfiDRAFT_1115 | Not Available | + | 1127607 - 1127978 | 13163.1 |
| protein-tyrosine phosphatase, low molecular weight | AfiDRAFT_1116 | Not Available | + | 1127971 - 1128498 | 18920.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
