Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | AfiDRAFT_1037 | Not Available | - | 1058915 - 1059802 | 32969.6 |
| acyl-homoserine-lactone synthase | AfiDRAFT_1038 | Not Available | - | 1059955 - 1060620 | 24163.2 |
| transcriptional regulator, luxr family | AfiDRAFT_1039 | Not Available | - | 1060712 - 1061437 | 26802.1 |
| radical sam domain protein | AfiDRAFT_1040 | Not Available | + | 1061898 - 1062932 | 37631.2 |
| methyltransferase type 11 | AfiDRAFT_1041 | Not Available | + | 1063115 - 1064164 | 38436.6 |
| phosphate transporter | AfiDRAFT_1042 | Not Available | + | 1064178 - 1065248 | 36107.0 |
| hypothetical protein | AfiDRAFT_1043 | Not Available | + | 1065248 - 1066000 | 27059.7 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | AfiDRAFT_1044 | Not Available | + | 1066004 - 1067425 | 50292.3 |
| glycosyl transferase family 2 | AfiDRAFT_1045 | Not Available | + | 1067431 - 1068126 | 25932.3 |
| protein of unknown function duf2064 | AfiDRAFT_1046 | Not Available | + | 1068129 - 1068737 | 22272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
