Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. 1NLS2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia sp. 1NLS2
Accession NumberADVZ00000000.1
Gene Summary
Adenine Count
769968 bp
Thymine Count
767149 bp
Guanine Count
1216555 bp
Cytosine Count
1218084 bp
Genome Length
3971756 bp
Protein-coding Genes
3804 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | AfiDRAFT_1027 | Not Available | + | 1050453 - 1050776 | 11346.0 |
| putative conjugal transfer protein trbd | AfiDRAFT_1028 | Not Available | + | 1050776 - 1051045 | 9528.8 |
| aaa atpase | AfiDRAFT_1029 | Not Available | + | 1051056 - 1053488 | 89661.8 |
| p-type conjugative transfer protein trbj | AfiDRAFT_1030 | Not Available | + | 1053485 - 1054228 | 26605.3 |
| conserved hypothetical protein | AfiDRAFT_1031 | Not Available | + | 1054228 - 1054542 | 11307.3 |
| p-type conjugative transfer protein trbl | AfiDRAFT_1032 | Not Available | + | 1054548 - 1055813 | 42145.6 |
| conjugal transfer protein | AfiDRAFT_1033 | Not Available | + | 1055817 - 1056497 | 25202.8 |
| p-type conjugative transfer protein trbg | AfiDRAFT_1034 | Not Available | + | 1056494 - 1057483 | 35841.8 |
| conjugation trbi family protein | AfiDRAFT_1035 | Not Available | + | 1057480 - 1058652 | 41131.8 |
| protein of unknown function duf2274 | AfiDRAFT_1036 | Not Available | + | 1058663 - 1058932 | 9558.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
