Escherichia coli MS 198-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli MS 198-1 is a Gram-negative, rod-shaped bacterium that typically arranges itself in pairs or as single cells. This strain thrives optimally at 37.0°C, which aligns with the body temperature of many warm-blooded hosts, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli MS 198-1 possesses the metabolic versatility to grow in both aerobic and anaerobic environments, allowing it to exploit various ecological niches within its host. The Gram-negative cell wall structure of E. coli MS 198-1 contributes to its resilience and adaptability in diverse physiological conditions, a trait common among members of the Enterobacteriaceae family. The ability to exist in pairs or as single cells may influence its interactions with host tissues, potentially affecting its colonization dynamics and nutrient acquisition strategies. Understanding the traits of E. coli MS 198-1 helps elucidate its role in the microbiome of its host and its capabilities in various metabolic pathways. This strain's facultative anaerobic nature may facilitate its survival in fluctuating oxygen environments within the host, allowing it to adapt to changes in local microenvironments such as those found in the gastrointestinal tract. This adaptability underscores the ecological significance of E. coli MS 198-1 in host-associated microbiomes, where it may play a role in nutrient cycling and host health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainMS 198-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli MS 198-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli MS 198-1


Gene Summary

Adenine Count

1295309 bp

Thymine Count

1288060 bp

Guanine Count

1333924 bp

Cytosine Count

1319197 bp

Genome Length

5236490 bp

Protein-coding Genes

5435 genes

Non-Coding Genes

292 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail componentHMPREF9552_00281Not Available-250971 - 25295772911.7
Tail componentHMPREF9552_00282Not Available-252938 - 25335115139.9
Tail componentHMPREF9552_00283Not Available-253378 - 25380915790.7
Major tail protein vHMPREF9552_00284Not Available-253828 - 25457726332.9
Tail componentHMPREF9552_00285Not Available-254585 - 25498014880.3
Tail componentHMPREF9552_00286Not Available-254977 - 25551020153.1
Head-tail joining proteinHMPREF9552_00287Not Available-255526 - 25587912667.8
hypothetical proteinHMPREF9552_00288P36276-255872 - 25627914662.4
Bacteriophage major capsid proteinHMPREF9552_00289P68650-256298 - 25732638558.0
Bacteriophage head decoration proteinHMPREF9552_00290P36275-257384 - 25773111965.1

Displaying genes 1 – 10 of 5727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

311 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 311 metabolites