Edwardsiella tarda ATCC 23685

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Edwardsiella

Description

Edwardsiella tarda ATCC 23685 is a Gram-negative bacterium recognized for its relevance in both aquatic environments and as a potential pathogen in various hosts. This organism is part of the family Enterobacteriaceae and is characterized by its rod-shaped morphology. E. tarda is known to thrive in freshwater environments, indicating its adaptation to aquatic ecosystems. The biochemical properties of E. tarda include the ability to ferment certain carbohydrates, which may contribute to its metabolic versatility in diverse ecological niches. Additionally, its Gram-negative cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, is significant for its interactions with the environment and potential host organisms. E. tarda is often studied in the context of fish pathology, as it has been implicated in diseases affecting both freshwater and marine species. Understanding the traits of E. tarda, particularly its Gram-negative nature and metabolic capabilities, can provide insights into its ecological roles and interactions within aquatic ecosystems. The presence of E. tarda in freshwater habitats suggests that it may play a role in nutrient cycling and microbial community dynamics, emphasizing its importance in maintaining ecological balance in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusEdwardsiella
SpeciesEdwardsiella tarda
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Edwardsiella tarda ATCC 23685

Accession NumberADGK00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3877 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Trna-aspNot AvailableNot Available+3624546 - 3624622Not Available
Trna-gluNot AvailableNot Available+3625575 - 3625650Not Available
translation elongation factor tuEDWATA_04067Not Available+3625686 - 362675839364.2
toxin-antitoxin system, antitoxin component, xre familyEDWATA_04068Not Available-3626759 - 362725917960.3
transposase-like proteinEDWATA_04069Not Available+3627520 - 362781911750.4
hypothetical proteinEDWATA_04070Not Available+3628028 - 36282287307.81
toxin-antitoxin system, antitoxin component, xre familyEDWATA_04071Not Available-3628478 - 36287128360.94
phage regulatory protein, rha familyEDWATA_04072Not Available+3629164 - 362973021282.8
hypothetical proteinEDWATA_04074Not Available+3630472 - 36306757503.84

Displaying genes 4071 – 4079 of 4079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

322 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 322 metabolites