Thomasclavelia spiroformis DSM 1552

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Thomasclavelia

Description

Thomasclavelia spiroformis DSM 1552 is a Gram-positive, anaerobic bacterium characterized by its distinct spiral morphology. This microbe thrives in environments devoid of oxygen, suggesting a metabolic adaptation to anaerobic conditions, which is typical for certain members of the clostridial group. The Gram-positive nature of T. spiroformis indicates a thick peptidoglycan layer in its cell wall, a trait that can contribute to its resilience in specific ecological niches. As an anaerobe, T. spiroformis is likely involved in biochemical processes that occur in environments such as the gastrointestinal tracts of animals or in anaerobic sediments, where oxygen is limited. The unique spiral shape may facilitate motility or colonization in these environments, potentially allowing it to navigate through viscous substrates or biofilms. Further studies on Thomasclavelia spiroformis could provide insights into its role in nutrient cycling or its interactions with other microbial communities in anaerobic habitats. Given its specific traits, this organism may contribute to the degradation of complex organic materials, highlighting its importance in maintaining ecosystem health and facilitating energy flow in anaerobic systems. Understanding the metabolic pathways and ecological functions of T. spiroformis could enhance our knowledge of microbial diversity and ecosystem dynamics in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusThomasclavelia
SpeciesThomasclavelia spiroformis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thomasclavelia spiroformis DSM 1552

Accession NumberABIK00000000.2

Gene Summary

Adenine Count

898620 bp

Thymine Count

892320 bp

Guanine Count

368364 bp

Cytosine Count

348181 bp

Genome Length

2507485 bp

Protein-coding Genes

2465 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinCLOSPI_00007Not Available-7275 - 826437759.7
l-asparaginase, type iiCLOSPI_00008P43843-8281 - 926135974.5
pep-utilizing enzyme, tim barrel domain proteinCLOSPI_00009P22983-9346 - 1003224929.3
pyruvate, phosphate dikinaseCLOSPI_00010Not Available-10139 - 1201369187.9
dead/deah box helicaseCLOSPI_00011Q8Y8N0-12234 - 1382960492.6
putative chloramphenicol o-acetyltransferaseCLOSPI_00012P26826-14100 - 1442312789.4
hypothetical proteinCLOSPI_00013Not Available-14641 - 148959522.21
hypothetical proteinCLOSPI_00014Not Available-15050 - 1589833983.7
swim zinc finger domain proteinCLOSPI_00015Not Available-15891 - 1667630329.3
mutator mutt proteinCLOSPI_00016P77788+16914 - 1730014698.8

Displaying genes 11 – 20 of 2535 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

114 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 114 metabolites