Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Oceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Oceanicola |
| Species | Oceanicola sp. D3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
722342 bp
Thymine Count
717828 bp
Guanine Count
1299888 bp
Cytosine Count
1313554 bp
Genome Length
4053612 bp
Protein-coding Genes
4057 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tape measure protein | FHY55_RS11210 | Not Available | + | 2213532 - 2214194 | 23054.7 |
| Tail protein | FHY55_RS11215 | Not Available | + | 2214229 - 2214861 | 23104.0 |
| Minor tail protein | FHY55_RS11220 | Not Available | + | 2214858 - 2215784 | 33455.3 |
| Gta-like protein | FHY55_RS11225 | Not Available | + | 2215777 - 2216235 | 16883.1 |
| Tail protein | FHY55_RS11230 | Not Available | + | 2216235 - 2220167 | 141022.0 |
| Ribonuclease iii | FHY55_RS11235 | Not Available | + | 2220160 - 2220870 | 24525.9 |
| trar/dksa family transcriptional regulator | FHY55_RS11240 | Not Available | - | 2221173 - 2221511 | 12424.8 |
| Serine acetyltransferase | FHY55_RS11245 | Not Available | + | 2221603 - 2222412 | 28995.0 |
| lola family protein | FHY55_RS00010 | Not Available | + | 2035 - 2649 | 22216.7 |
| transglycosylase slt domain-containing protein | FHY55_RS00015 | Not Available | - | 2715 - 3302 | 22152.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.