Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter cryophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320063 bp
Thymine Count
1318214 bp
Guanine Count
682127 bp
Cytosine Count
671391 bp
Genome Length
3991797 bp
Protein-coding Genes
3359 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 125 - 236 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 396 - 507 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 572 - 2093 | Not Available |
| coa-binding protein | FA046_00005 | Not Available | Negative | 608 - 967 | 13365.1 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2491 - 5366 | Not Available |
| fad-binding protein | FA046_00010 | Not Available | Negative | 991 - 2559 | 57338.2 |
| lema family protein | FA046_00015 | Not Available | Positive | 2649 - 3227 | 21369.5 |
| tpm domain-containing protein | FA046_00020 | Not Available | Positive | 3426 - 3854 | 16316.4 |
| tpm domain-containing protein | FA046_00025 | Not Available | Positive | 3873 - 4643 | 26325.4 |
| nudix hydrolase | FA046_00030 | Not Available | Positive | 4756 - 5301 | 20841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
