Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 4408 - 7287 | Not Available |
| nad-dependent epimerase/dehydratase family protein | FBD94_00030 | Not Available | - | 4256 - 5182 | 34665.9 |
| crp/fnr family transcriptional regulator | FBD94_00035 | Not Available | - | 5255 - 5878 | 24018.4 |
| rna polymerase sigma-70 factor | FBD94_00040 | Not Available | + | 6008 - 6562 | 22199.7 |
| duf4974 domain-containing protein | FBD94_00045 | Not Available | + | 6654 - 7670 | 38332.1 |
| susc/raga family tonb-linked outer membrane protein | FBD94_00050 | Not Available | + | 8077 - 11220 | 115102.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | FBD94_00055 | Not Available | + | 11233 - 12705 | 55213.6 |
| metallophosphoesterase family protein | FBD94_00060 | Not Available | + | 12717 - 14012 | 48860.9 |
| glycerophosphodiester phosphodiesterase family protein | FBD94_00065 | Not Available | + | 14024 - 14860 | 31405.2 |
| rna polymerase sigma-70 factor | FBD94_00070 | Not Available | + | 14916 - 15521 | 23517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.