Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 53 - 164 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 288 - 3166 | Not Available |
| coa-binding protein | EZ437_00005 | Not Available | - | 874 - 1233 | 13097.9 |
| dinb family protein | EZ437_00010 | Not Available | - | 1230 - 1691 | 17214.3 |
| fad-binding protein | EZ437_00015 | Not Available | - | 1722 - 3263 | 56493.3 |
| lema family protein | EZ437_00020 | Not Available | + | 3416 - 3997 | 21260.4 |
| 16s ribosomal rna | Not Available | Not Available | + | 3742 - 5259 | Not Available |
| tpm domain-containing protein | EZ437_00025 | Not Available | + | 4003 - 4446 | 16259.2 |
| tpm domain-containing protein | EZ437_00030 | Not Available | + | 4450 - 5226 | 26422.7 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 5187 - 5590 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.