Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | EZ437_00035 | Not Available | + | 5240 - 5791 | 20790.9 |
| chromosomal replication initiator protein dnaa | EZ437_00040 | Not Available | - | 5880 - 7310 | 53948.2 |
| methylmalonyl-coa mutase | EZ437_00045 | Not Available | - | 7505 - 9058 | 56999.7 |
| hypothetical protein | EZ437_00050 | Not Available | - | 9061 - 9591 | 19993.6 |
| iron-sulfur cluster assembly accessory protein | EZ437_00055 | Not Available | + | 9693 - 10046 | 12814.0 |
| ftsx-like permease family protein | EZ437_00060 | Not Available | + | 10137 - 11369 | 44009.9 |
| dtdp-glucose 4,6-dehydratase | EZ437_00065 | Not Available | - | 11379 - 12431 | 39787.6 |
| hypothetical protein | EZ437_00070 | Not Available | - | 12436 - 13002 | 22046.2 |
| udp-glucose 4-epimerase gale | EZ437_00075 | Not Available | - | 13005 - 14027 | 37330.3 |
| sdr family oxidoreductase | EZ437_00080 | Not Available | - | 14036 - 15025 | 37310.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.