Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Saccharopolyspora
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Saccharopolyspora |
| Species | Saccharopolyspora karakumensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Saccharopolyspora karakumensis
Accession NumberSMLA00000000.1
Gene Summary
Adenine Count
1009023 bp
Thymine Count
1009596 bp
Guanine Count
2330188 bp
Cytosine Count
2321906 bp
Genome Length
6670713 bp
Protein-coding Genes
5983 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tatd family deoxyribonuclease | E1202_04035 | Not Available | - | 849781 - 850614 | 30439.6 |
| methionine--trna ligase | E1202_04040 | Not Available | - | 850614 - 852410 | 66439.9 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | E1202_04045 | Not Available | - | 852539 - 853375 | 29369.0 |
| phospholipid carrier-dependent glycosyltransferase | E1202_04050 | Not Available | + | 853644 - 855098 | 54857.2 |
| abc transporter permease | E1202_04055 | Not Available | - | 855099 - 855791 | 24098.6 |
| abc transporter atp-binding protein | E1202_04060 | Not Available | - | 855794 - 856672 | 31891.0 |
| histidine kinase | E1202_04065 | Not Available | + | 856935 - 858005 | 37692.7 |
| response regulator transcription factor | E1202_04070 | Not Available | + | 858002 - 858598 | 21306.9 |
| l-lysine 6-transaminase | E1202_04075 | Not Available | - | 858676 - 860028 | 49333.1 |
| sam-dependent methyltransferase | E1202_04080 | Not Available | - | 860192 - 860980 | 28609.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.