Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | EXZ48_03955 | Not Available | + | 839514 - 840827 | 47468.6 |
| deor/glpr transcriptional regulator | EXZ48_03960 | Not Available | - | 840970 - 841731 | 27283.8 |
| abc transporter | EXZ48_03965 | Not Available | + | 841963 - 842928 | 35434.9 |
| atp-binding cassette domain-containing protein | EXZ48_03970 | Not Available | + | 843023 - 844042 | 36680.8 |
| abc transporter permease subunit | EXZ48_03975 | Not Available | + | 844047 - 846080 | 72562.1 |
| choline kinase | EXZ48_03980 | Not Available | + | 846080 - 846991 | 33501.7 |
| fad-dependent oxidoreductase | EXZ48_03985 | Not Available | + | 846988 - 849429 | 89118.4 |
| metal/formaldehyde-sensitive transcriptional repressor | EXZ48_03990 | Not Available | + | 849518 - 849790 | 9982.25 |
| cation transporter | EXZ48_03995 | Not Available | + | 849877 - 850878 | 36117.9 |
| class i sam-dependent methyltransferase | EXZ48_04000 | Not Available | - | 850890 - 851531 | 22203.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.