Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXZ48_03755 | Not Available | + | 797910 - 799502 | 58393.6 |
| abc transporter permease | EXZ48_03760 | Not Available | + | 799587 - 800522 | 33981.6 |
| abc transporter permease | EXZ48_03765 | Not Available | + | 800528 - 801349 | 29260.2 |
| abc transporter atp-binding protein | EXZ48_03770 | Not Available | + | 801346 - 802257 | 33098.7 |
| abc transporter atp-binding protein | EXZ48_03775 | Not Available | + | 802254 - 803216 | 34440.8 |
| sigma-54-dependent fis family transcriptional regulator | EXZ48_03780 | Not Available | + | 803305 - 805176 | 67792.4 |
| 2,3-butanediol dehydrogenase | EXZ48_03785 | Not Available | + | 805339 - 806412 | 37756.2 |
| nad(p)/fad-dependent oxidoreductase | EXZ48_03790 | Not Available | + | 806479 - 808278 | 67286.8 |
| aspartate aminotransferase family protein | EXZ48_03795 | Not Available | - | 808388 - 809761 | 49545.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_03800 | Not Available | - | 809821 - 811317 | 52864.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.