Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_03705 | Not Available | + | 787578 - 787928 | 12426.2 |
| copper oxidase | EXZ48_03710 | Not Available | + | 787999 - 789495 | 53432.4 |
| cytochrome c | EXZ48_03715 | Not Available | + | 789492 - 789926 | 15231.1 |
| cytochrome c | EXZ48_03720 | Not Available | + | 790076 - 790507 | 14779.8 |
| d-aminopeptidase | EXZ48_03725 | Not Available | + | 790642 - 792198 | 56106.1 |
| d-amino-acid transaminase | EXZ48_03730 | Not Available | + | 792333 - 793184 | 30706.9 |
| s58 family peptidase | EXZ48_03735 | Not Available | + | 793267 - 794304 | 35502.6 |
| peptide abc transporter | EXZ48_03740 | Not Available | + | 794301 - 795101 | 28546.8 |
| lysr family transcriptional regulator | EXZ48_03745 | Not Available | - | 795073 - 796044 | 35737.8 |
| amidohydrolase | EXZ48_03750 | Not Available | + | 796228 - 797853 | 57447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.