Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase | EXZ48_03455 | Not Available | + | 727773 - 728696 | 32290.9 |
| adenine deaminase | EXZ48_03460 | Not Available | + | 728693 - 730483 | 62294.6 |
| dmt family transporter | EXZ48_03465 | Not Available | + | 730480 - 731382 | 30916.1 |
| amidohydrolase | EXZ48_03470 | Not Available | + | 731414 - 732700 | 44974.6 |
| yafy family transcriptional regulator | EXZ48_03475 | Not Available | + | 732750 - 733454 | 26209.7 |
| drug:proton antiporter | EXZ48_03480 | Not Available | + | 733509 - 733889 | 13475.9 |
| amino acid permease | EXZ48_03485 | Not Available | - | 733952 - 735469 | 54092.8 |
| duf1937 family protein | EXZ48_03490 | Not Available | - | 735507 - 735866 | 13063.6 |
| glycerol kinase | EXZ48_03495 | Not Available | - | 735907 - 737301 | 49136.4 |
| fad-dependent oxidoreductase | EXZ48_03500 | Not Available | - | 737301 - 738527 | 44144.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.