Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | EXZ48_02890 | Not Available | + | 616105 - 617475 | 50092.3 |
| 3-keto-5-aminohexanoate cleavage protein | EXZ48_02895 | Not Available | + | 617485 - 618414 | 33578.6 |
| gnat family n-acetyltransferase | EXZ48_02900 | Not Available | + | 618424 - 618918 | 18015.4 |
| histone deacetylase family protein | EXZ48_02905 | Not Available | + | 618915 - 619943 | 36829.4 |
| lysr family transcriptional regulator | EXZ48_02910 | Not Available | - | 619940 - 620896 | 35729.2 |
| acyl-coa thioesterase | EXZ48_02915 | Not Available | + | 620937 - 621422 | 18039.6 |
| lysr family transcriptional regulator | EXZ48_02925 | Not Available | - | 622530 - 623432 | 33660.7 |
| leucyl aminopeptidase | EXZ48_02930 | Not Available | + | 623692 - 625206 | 53130.9 |
| alpha/beta fold hydrolase | EXZ48_02935 | Not Available | + | 625228 - 626133 | 33328.3 |
| abc transporter substrate-binding protein | EXZ48_02940 | Not Available | + | 626159 - 627820 | 60199.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.