Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_02625 | Not Available | + | 558467 - 558985 | 18417.8 |
| m48 family peptidase | EXZ48_02630 | Not Available | - | 559784 - 560506 | 27858.9 |
| type i restriction endonuclease subunit r | EXZ48_02635 | Not Available | - | 560503 - 563706 | 121002.0 |
| hypothetical protein | EXZ48_02640 | Not Available | - | 563703 - 565373 | 60477.6 |
| restriction endonuclease subunit s | EXZ48_02645 | Not Available | - | 565352 - 566665 | 49308.3 |
| giy-yig nuclease family protein | EXZ48_02650 | Not Available | - | 566662 - 567660 | 36012.6 |
| type i restriction-modification system subunit m | EXZ48_02655 | Not Available | - | 567653 - 569221 | 59540.6 |
| hypothetical protein | EXZ48_02660 | Not Available | - | 569232 - 569810 | 20355.8 |
| hypothetical protein | EXZ48_02675 | Not Available | - | 570667 - 572763 | 78349.5 |
| is110 family transposase | EXZ48_02680 | Not Available | + | 573087 - 573806 | 27150.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.