Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf883 family protein | EXZ48_02460 | Not Available | - | 532290 - 532910 | 22516.8 |
| heme abc transporter atp-binding protein | EXZ48_02465 | Not Available | - | 532816 - 533604 | 27905.2 |
| iron abc transporter permease | EXZ48_02470 | Not Available | - | 533611 - 534732 | 38105.9 |
| hemin abc transporter substrate-binding protein | EXZ48_02475 | Not Available | - | 534719 - 535660 | 32621.5 |
| hemin-degrading factor | EXZ48_02480 | Not Available | - | 535736 - 536782 | 38660.1 |
| hypothetical protein | EXZ48_02485 | Not Available | + | 537017 - 537448 | 14965.2 |
| energy transducer tonb | EXZ48_02490 | Not Available | + | 537509 - 538405 | 31044.9 |
| duf2325 domain-containing protein | EXZ48_02495 | Not Available | + | 538781 - 539176 | 14534.2 |
| hypothetical protein | EXZ48_02500 | Not Available | + | 539173 - 539442 | 9939.9 |
| antibiotic biosynthesis monooxygenase | EXZ48_02505 | Not Available | + | 539458 - 539772 | 11707.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.