Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_02410 | Not Available | + | 522458 - 523459 | 36140.8 |
| l-iditol 2-dehydrogenase | EXZ48_02415 | Not Available | + | 523456 - 524229 | 27137.6 |
| mannitol dehydrogenase family protein | EXZ48_02420 | Not Available | + | 524281 - 525765 | 53260.3 |
| had family hydrolase | EXZ48_02425 | Not Available | + | 525845 - 526537 | 24783.8 |
| ribulokinase | EXZ48_02430 | Not Available | + | 526537 - 528120 | 56683.9 |
| response regulator | EXZ48_02435 | Not Available | - | 528443 - 529237 | 27940.7 |
| hypothetical protein | EXZ48_02440 | Not Available | + | 529369 - 529575 | 7758.16 |
| rna polymerase sigma factor | EXZ48_02445 | Not Available | + | 529583 - 530137 | 20741.7 |
| pas domain s-box protein | EXZ48_02450 | Not Available | + | 530262 - 531767 | 54810.4 |
| hypothetical protein | EXZ48_02455 | Not Available | - | 531797 - 532228 | 15303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.