Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein tolq | EXZ48_01910 | Not Available | + | 411951 - 412667 | 25627.2 |
| protein tolr | EXZ48_01915 | Not Available | + | 412697 - 413149 | 15715.3 |
| hypothetical protein | EXZ48_01920 | Not Available | + | 413159 - 414271 | 39888.9 |
| tol-pal system protein tolb | EXZ48_01925 | Not Available | + | 414293 - 415597 | 47869.7 |
| peptidoglycan-associated lipoprotein pal | EXZ48_01930 | Not Available | + | 415837 - 416373 | 18965.5 |
| tol-pal system protein ybgf | EXZ48_01935 | Not Available | + | 416525 - 417538 | 36222.1 |
| trna lysidine(34) synthetase tils | EXZ48_01940 | Not Available | + | 417559 - 418845 | 45044.0 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | EXZ48_01945 | Not Available | + | 419046 - 420968 | 69873.2 |
| phosphoglucosamine mutase | EXZ48_01950 | Not Available | + | 421309 - 422661 | 48720.6 |
| porin family protein | EXZ48_01955 | Not Available | + | 422924 - 423757 | 30093.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.