Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_01860 | Not Available | + | 404517 - 405011 | 17161.3 |
| yebc/pmpr family dna-binding transcriptional regulator | EXZ48_01865 | Not Available | + | 405181 - 405927 | 26761.3 |
| llm class flavin-dependent oxidoreductase | EXZ48_01870 | Not Available | - | 406106 - 407107 | 36188.6 |
| crossover junction endodeoxyribonuclease ruvc | EXZ48_01875 | Not Available | + | 407279 - 407791 | 17987.9 |
| abrb/maze/spovt family dna-binding domain-containing protein | EXZ48_01880 | Not Available | + | 407847 - 408107 | 9756.39 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_01885 | Not Available | + | 408085 - 408504 | 15703.9 |
| holliday junction branch migration protein ruva | EXZ48_01890 | Not Available | + | 408516 - 409133 | 21302.7 |
| holliday junction branch migration dna helicase ruvb | EXZ48_01895 | Not Available | + | 409174 - 410214 | 38322.3 |
| metallophosphoesterase | EXZ48_01900 | Not Available | + | 410215 - 411117 | 32218.0 |
| tol-pal system-associated acyl-coa thioesterase | EXZ48_01905 | Not Available | + | 411164 - 411640 | 17905.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.