Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EXZ48_01760 | Not Available | - | 386280 - 387272 | 34539.6 |
| atp-binding cassette domain-containing protein | EXZ48_01765 | Not Available | - | 387349 - 389172 | 64649.4 |
| 50s ribosomal protein l31 | EXZ48_01770 | Not Available | + | 389363 - 389584 | 8166.7 |
| duf1465 family protein | EXZ48_01775 | Not Available | - | 389736 - 390254 | 19298.0 |
| duf1192 domain-containing protein | EXZ48_01780 | Not Available | - | 390633 - 390821 | 7000.34 |
| mfs transporter | EXZ48_01785 | Not Available | - | 390818 - 392095 | 44780.7 |
| phosphoglycerate kinase | EXZ48_01790 | Not Available | - | 392733 - 393932 | 41588.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EXZ48_01795 | Not Available | - | 394010 - 395011 | 35474.3 |
| transketolase | EXZ48_01800 | Not Available | - | 395077 - 397059 | 71002.3 |
| duf4164 family protein | EXZ48_01805 | Not Available | + | 397389 - 397661 | 10524.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.