Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | EXZ48_01710 | Not Available | - | 378737 - 379204 | 16018.2 |
| duf465 domain-containing protein | EXZ48_01715 | Not Available | - | 379255 - 379458 | 7689.47 |
| duf465 domain-containing protein | EXZ48_01720 | Not Available | + | 379675 - 379848 | 6565.87 |
| arsr family transcriptional regulator | EXZ48_01725 | Not Available | - | 380037 - 380297 | 9800.81 |
| sulfite exporter taue/safe family protein | EXZ48_01730 | Not Available | - | 380370 - 381140 | 27579.8 |
| thiamine phosphate synthase | EXZ48_01735 | Not Available | + | 381230 - 381883 | 22632.1 |
| sel1 repeat family protein | EXZ48_01740 | Not Available | + | 381893 - 383035 | 40590.2 |
| inositol monophosphatase | EXZ48_01745 | Not Available | + | 383216 - 384016 | 28590.3 |
| flagellar motor protein mota | EXZ48_01750 | Not Available | + | 384126 - 385205 | 38523.7 |
| peptidoglycan -binding protein | EXZ48_01755 | Not Available | + | 385208 - 386239 | 37936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.