Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | EXZ48_01360 | Not Available | + | 290526 - 293519 | 107974.0 |
| sarcosine oxidase subunit gamma family protein | EXZ48_01365 | Not Available | + | 293512 - 294060 | 18684.2 |
| gnat family n-acetyltransferase | EXZ48_01370 | Not Available | - | 294067 - 294591 | 19505.0 |
| maoc family dehydratase | EXZ48_01375 | Not Available | - | 294588 - 295076 | 18265.9 |
| glycogen debranching enzyme glgx | EXZ48_01380 | Not Available | - | 295183 - 297156 | 72009.1 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | EXZ48_01385 | Not Available | - | 297158 - 298789 | 58133.9 |
| glycogen synthase glga | EXZ48_01390 | Not Available | - | 298794 - 300233 | 51628.9 |
| glucose-1-phosphate adenylyltransferase | EXZ48_01395 | Not Available | - | 300242 - 301504 | 47109.4 |
| 1,4-alpha-glucan branching protein glgb | EXZ48_01400 | Not Available | - | 301527 - 303740 | 82711.8 |
| glycogen/starch/alpha-glucan phosphorylase | EXZ48_01405 | Not Available | - | 303740 - 306199 | 92217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.