Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | EXZ48_01105 | Not Available | + | 239062 - 240516 | 51061.6 |
| xylose isomerase | EXZ48_01110 | Not Available | + | 240544 - 241854 | 48497.2 |
| globin-coupled sensor protein | EXZ48_01115 | Not Available | + | 242206 - 243714 | 54116.8 |
| laci family transcriptional regulator | EXZ48_01120 | Not Available | - | 243752 - 244783 | 36960.5 |
| sugar abc transporter atp-binding protein | EXZ48_01125 | Not Available | + | 245003 - 246529 | 55778.6 |
| abc transporter permease | EXZ48_01130 | Not Available | + | 246575 - 247585 | 35136.0 |
| abc transporter substrate-binding protein | EXZ48_01135 | Not Available | + | 247679 - 248632 | 34237.1 |
| sugar phosphate isomerase/epimerase | EXZ48_01140 | Not Available | + | 248863 - 249915 | 39088.9 |
| gfo/idh/moca family oxidoreductase | EXZ48_01145 | Not Available | + | 249964 - 251148 | 42363.4 |
| hd-gyp domain-containing protein | EXZ48_01150 | Not Available | - | 251199 - 252065 | 31934.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.