Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EXZ48_01055 | Not Available | - | 225966 - 226880 | 33648.4 |
| lysine--trna ligase | EXZ48_01060 | Not Available | - | 226993 - 228486 | 56512.5 |
| glutamate--trna ligase | EXZ48_01065 | Not Available | - | 228500 - 229969 | 54595.0 |
| slc13 family permease | EXZ48_01070 | Not Available | - | 230145 - 231917 | 62105.4 |
| terc family protein | EXZ48_01075 | Not Available | - | 232213 - 232965 | 26999.1 |
| tetr/acrr family transcriptional regulator | EXZ48_01080 | Not Available | - | 233112 - 233771 | 24452.5 |
| hlyd family secretion protein | EXZ48_01085 | Not Available | + | 233915 - 235117 | 41631.1 |
| dha2 family efflux mfs transporter permease subunit | EXZ48_01090 | Not Available | + | 235144 - 236736 | 57330.9 |
| metallophosphoesterase | EXZ48_01095 | Not Available | + | 236774 - 237913 | 41211.3 |
| laci family dna-binding transcriptional regulator | EXZ48_01100 | Not Available | + | 238002 - 239051 | 36016.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.