Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoprotocatechuate degradation operon regulator hpar | EXZ48_00565 | Not Available | + | 126393 - 126872 | 17854.5 |
| 4-hydroxy-2-oxoheptanedioate aldolase | EXZ48_00570 | Not Available | - | 126885 - 127691 | 28199.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | EXZ48_00575 | Not Available | - | 127701 - 128504 | 28641.4 |
| faa hydrolase family protein | EXZ48_00580 | Not Available | - | 128501 - 129376 | 31852.9 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | EXZ48_00585 | Not Available | - | 129412 - 130392 | 37376.4 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | EXZ48_00590 | Not Available | - | 130453 - 131970 | 54145.0 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | EXZ48_00595 | Not Available | - | 131993 - 132379 | 14202.2 |
| flavin reductase | EXZ48_00600 | Not Available | - | 132454 - 132966 | 18419.8 |
| pyoverdin chromophore biosynthetic protein pvcc | EXZ48_00605 | Not Available | - | 132977 - 134536 | 57499.1 |
| helix-turn-helix domain-containing protein | EXZ48_00610 | Not Available | + | 134632 - 135513 | 32559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.