Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | EXZ48_04210 | Not Available | - | 895092 - 895346 | 9221.86 |
| asparagine synthase (glutamine-hydrolyzing) | EXZ48_04215 | Not Available | - | 895349 - 897304 | 71643.7 |
| hypothetical protein | EXZ48_04220 | Not Available | - | 897308 - 898417 | 40927.0 |
| glutaredoxin | EXZ48_04225 | Not Available | - | 898565 - 899347 | 28406.0 |
| merr family transcriptional regulator | EXZ48_04230 | Not Available | + | 899399 - 899803 | 14705.0 |
| sugar abc transporter substrate-binding protein | EXZ48_04235 | Not Available | + | 899915 - 901153 | 44415.9 |
| sugar abc transporter atp-binding protein | EXZ48_04240 | Not Available | + | 901213 - 902763 | 55730.0 |
| abc transporter permease | EXZ48_04245 | Not Available | + | 902767 - 903738 | 34391.4 |
| carbohydrate kinase | EXZ48_04250 | Not Available | + | 903751 - 905286 | 54699.9 |
| deor/glpr transcriptional regulator | EXZ48_04255 | Not Available | + | 905283 - 906059 | 28115.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.