Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization protein | EXZ48_04055 | Not Available | + | 864187 - 864435 | 9304.96 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_04060 | Not Available | + | 864432 - 864845 | 15076.2 |
| eal domain-containing protein | EXZ48_04065 | Not Available | + | 865072 - 867120 | 76544.3 |
| gntr family transcriptional regulator | EXZ48_04070 | Not Available | - | 867133 - 867795 | 24862.0 |
| divalent metal cation transporter | EXZ48_04075 | Not Available | + | 868076 - 869305 | 42753.4 |
| lamb/ycsf family protein | EXZ48_04080 | Not Available | + | 869380 - 870147 | 26683.9 |
| putative hydro-lyase | EXZ48_04085 | Not Available | + | 870157 - 870966 | 28762.5 |
| 5-oxoprolinase/urea amidolyase family protein | EXZ48_04090 | Not Available | + | 870974 - 872566 | 55602.8 |
| atp-grasp domain-containing protein | EXZ48_04095 | Not Available | + | 872577 - 874307 | 60822.9 |
| cupin domain-containing protein | EXZ48_04100 | Not Available | - | 874348 - 875193 | 31505.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.