Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps biosynthesis choline kinase | EXZ48_04005 | Not Available | + | 851611 - 852519 | 32913.3 |
| transporter | EXZ48_04010 | Not Available | + | 852724 - 853752 | 37240.3 |
| sugar abc transporter atp-binding protein | EXZ48_04015 | Not Available | + | 853818 - 855344 | 54485.3 |
| abc transporter permease | EXZ48_04020 | Not Available | + | 855334 - 856356 | 35585.9 |
| sugar-binding transcriptional regulator | EXZ48_04025 | Not Available | + | 856358 - 857365 | 35760.1 |
| aldo/keto reductase | EXZ48_04030 | Not Available | + | 857362 - 858357 | 35365.9 |
| glycerol-3-phosphate dehydrogenase/oxidase | EXZ48_04035 | Not Available | + | 858367 - 860118 | 64042.0 |
| aldolase | EXZ48_04040 | Not Available | + | 860091 - 860933 | 30949.7 |
| carbohydrate kinase | EXZ48_04045 | Not Available | + | 860964 - 862493 | 54353.5 |
| gmc family oxidoreductase | EXZ48_04050 | Not Available | + | 862511 - 864115 | 58525.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.