Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | EXZ48_03905 | Not Available | - | 830349 - 831638 | 44932.7 |
| cysteine hydrolase | EXZ48_03910 | Not Available | - | 831652 - 832320 | 25150.1 |
| branched-chain amino acid abc transporter permease | EXZ48_03915 | Not Available | - | 832317 - 833345 | 35953.3 |
| branched-chain amino acid abc transporter permease | EXZ48_03920 | Not Available | - | 833349 - 834239 | 31212.6 |
| abc transporter atp-binding protein | EXZ48_03925 | Not Available | - | 834243 - 834950 | 24785.2 |
| abc transporter atp-binding protein | EXZ48_03930 | Not Available | - | 834943 - 835677 | 25552.9 |
| abc transporter substrate-binding protein | EXZ48_03935 | Not Available | - | 835730 - 836902 | 41429.1 |
| cysteine hydrolase | EXZ48_03940 | Not Available | - | 837024 - 837677 | 24209.8 |
| n-formylglutamate amidohydrolase | EXZ48_03945 | Not Available | - | 837674 - 838480 | 29308.8 |
| murr/rpir family transcriptional regulator | EXZ48_03950 | Not Available | + | 838628 - 839524 | 32744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.