Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-alpha-acetyl diaminobutyric acid deacetylase doeb | EXZ48_03855 | Not Available | + | 820784 - 821776 | 34470.5 |
| cupin domain-containing protein | EXZ48_03860 | Not Available | + | 821872 - 822486 | 22411.9 |
| sugar abc transporter substrate-binding protein | EXZ48_03865 | Not Available | + | 822625 - 823566 | 32273.5 |
| sugar abc transporter atp-binding protein | EXZ48_03870 | Not Available | + | 823636 - 824436 | 28823.9 |
| abc transporter permease | EXZ48_03875 | Not Available | + | 824433 - 825443 | 34681.2 |
| phosphotriesterase | EXZ48_03880 | Not Available | + | 825445 - 826536 | 40027.0 |
| cytoplasmic protein | EXZ48_03885 | Not Available | + | 826565 - 827329 | 27987.3 |
| ribokinase | EXZ48_03890 | Not Available | + | 827354 - 828265 | 30440.7 |
| btpa/sgcq family protein | EXZ48_03895 | Not Available | + | 828271 - 829104 | 29745.5 |
| zn-dependent hydrolase | EXZ48_03900 | Not Available | + | 829101 - 830345 | 43762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.