Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | EXZ48_03805 | Not Available | - | 811450 - 811932 | 17789.8 |
| plp-dependent aminotransferase family protein | EXZ48_03810 | Not Available | + | 812035 - 813420 | 50379.0 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | EXZ48_03815 | Not Available | + | 813544 - 814329 | 28982.9 |
| ectoine/hydroxyectoine abc transporter substrate-binding protein ehub | EXZ48_03820 | Not Available | + | 814393 - 815244 | 29622.6 |
| ectoine/hydroxyectoine abc transporter permease subunit ehuc | EXZ48_03825 | Not Available | + | 815450 - 816109 | 23712.8 |
| ectoine/hydroxyectoine abc transporter permease subunit ehud | EXZ48_03830 | Not Available | + | 816112 - 816774 | 24552.7 |
| ectoine utilization protein euta | EXZ48_03835 | Not Available | + | 816774 - 817556 | 27419.2 |
| hydroxyectoine utilization dehydratase eutb | EXZ48_03840 | Not Available | + | 817553 - 818560 | 34730.2 |
| ectoine utilization protein eutc | EXZ48_03845 | Not Available | + | 818557 - 819549 | 34502.6 |
| ectoine hydrolase doea | EXZ48_03850 | Not Available | + | 819599 - 820780 | 44191.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.