Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_03555 | Not Available | + | 753394 - 754290 | 31905.4 |
| abc transporter atp-binding protein | EXZ48_03560 | Not Available | + | 754292 - 756001 | 60848.9 |
| amidohydrolase | EXZ48_03565 | Not Available | + | 756109 - 757551 | 52247.4 |
| plp-dependent aminotransferase family protein | EXZ48_03570 | Not Available | - | 757600 - 759078 | 54387.1 |
| taurine abc transporter substrate-binding protein | EXZ48_03575 | Not Available | + | 759219 - 760238 | 35637.4 |
| atp-binding cassette domain-containing protein | EXZ48_03580 | Not Available | + | 760328 - 761140 | 29855.4 |
| abc transporter permease subunit | EXZ48_03585 | Not Available | + | 761133 - 761960 | 29734.3 |
| nuclear transport factor 2 family protein | EXZ48_03590 | Not Available | + | 762170 - 762556 | 14144.5 |
| fad-binding oxidoreductase | EXZ48_03595 | Not Available | + | 762575 - 763975 | 51711.1 |
| sulfoacetaldehyde acetyltransferase | EXZ48_03600 | Not Available | + | 764004 - 765779 | 63619.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.